Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918936.1_cds_XP_016468270.1_60928
CDS Infomation

[gene=LOC107790817] [db_xref=GeneID:107790817] [protein=phytochrome A-associated F-box protein-like] [protein_id=XP_016468270.1] [location=join(46520..47097,47854..48277)] [gbkey=CDS]
Sequence

ATGTCTAACACGAGTATGTACTCTGATGGGTTTTTCTCAAAACTCTCAGATGATCTTGTT
CTCAACATATTTTACAAGCTAGAAGATGACCCAAGAAACTGGGCTCGTTTATCTTGCGTT
TCTACAAAATTTTCTTCTATGATTCACAATATCTGCTACAAATCCAAATGCTCTTTGACC
ATTTCTTCAGTTGTTTCCGATCTCCTTAGCACACCATCTTCTACTTCAACCACCCCACCT
GTGGTCTGGGCTTCACTTTACAAGCTAGCCGTATGCTGCCCTGGTCTTCACCAAGCTGGT
GTTCTTTTGGAGAATTCCGATTTTGGGCTCGAACGTGAGCTCGGCCCAGATGAGAGTTAC
CTAGATCGGGCCTTGGCCCAATCCGGTAGTAGTTTACAGTCTCAGCCAATGCCTTCGTCG
AGTAATAACCAAATTGATTCTGGTGAAGTAGTAACTGATTGTGGTTGGTCTTTGTTTGAC
GATCTTATGTTTGATACTGTTTATGATGCTTCTGAATCAACCCCAAATCAGCCTGAGGTC
GTGGAGCCGCCCCAAAACGTAGTTGTGACCCCCTCAAGGGTTTCTAAGAGGCGGAAAATA
TATAGATCGCTTTGTTCTCATTTGGCATCCGGGGTATGGAACTTGAGCCGTGAGCAGGGG
AATAAGCTACTAGCAAGTAGATTTAAAGGGGATTGCTTGTACATATGTGATTGGCCTGGT
TGTATTCACATTGAGGAGAAGAGGAATTACATGCTATTTCGGGGGATTTTCAAGAATTTC
AAGCAGTCGAGGGTTTGGAGGACGATAAACGATGGTAACAGGAAGAAGATTGATCTGAAT
TGCGCGTTTTGCTCGTCGAACCAGACGTGGGATCTGCATTCGGCGTTCTGTTTGAGGAGG
TATTTTGGGTTCCATGATGATGGGGAACCAGTTGTTCGAGCTTATGTCTGTGAGAATGGC
CATGTTTCTGGAGCATGGACTGACTGGCCATTGTATACCTGA

Peptide Sequence

PEP ID

XP_016468270.1
PEP Infomation

PREDICTED: phytochrome A-associated F-box protein-like [Nicotiana tabacum]
Sequence

MSNTSMYSDGFFSKLSDDLVLNIFYKLEDDPRNWARLSCVSTKFSSMIHNICYKSKCSLT
ISSVVSDLLSTPSSTSTTPPVVWASLYKLAVCCPGLHQAGVLLENSDFGLERELGPDESY
LDRALAQSGSSLQSQPMPSSSNNQIDSGEVVTDCGWSLFDDLMFDTVYDASESTPNQPEV
VEPPQNVVVTPSRVSKRRKIYRSLCSHLASGVWNLSREQGNKLLASRFKGDCLYICDWPG
CIHIEEKRNYMLFRGIFKNFKQSRVWRTINDGNRKKIDLNCAFCSSNQTWDLHSAFCLRR
YFGFHDDGEPVVRAYVCENGHVSGAWTDWPLYT

Transcript Sequence

Gene sequence data has not been registered.